PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_13419
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 219aa    MW: 24080.7 Da    PI: 10.2769
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_13419genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2643.2e-202070256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g+
  PEQU_13419 20 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRGN 70
                7********.**********7.....337*************************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103225.6462077IPR001471AP2/ERF domain
PfamPF008475.2E-142069IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-222078IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.8E-332078IPR001471AP2/ERF domain
SMARTSM003805.3E-362083IPR001471AP2/ERF domain
PRINTSPR003675.3E-122132IPR001471AP2/ERF domain
CDDcd000188.56E-152879No hitNo description
PRINTSPR003675.3E-124359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
AQSPAPATTT ALTAGEVRRR YRGVRQRPWG KWAAEIRDPH KAARVWLGTF ETAEAAARAY  60
DEAALRFRGN RAKLNFPETV RVRQPVNLSP AIHLPESSSS VSHFEHRPLL RFRSFDAPRE  120
YMEYTRVLQG GDYRRMQPTA LMGQFIYPSS STASSSQSSP TFSSHSLTRG SDTASSSSAS  180
MPLFYLPPSE ARQSSSRPPE DSPAPPTSDS GEHPPACSG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-241980466ATERF1
3gcc_A2e-241980466ATERF1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408302.15e-46PREDICTED: ethylene-responsive transcription factor ERF113-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62322649
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-20ethylene response factor 110